IL_7ZPQ_155

3D structure

PDB id

7ZPQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the RQT-bound 80S ribosome from S. cerevisiae (C1)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.47 Å

Loop

Sequence

UCUAGACAGCC*GGCCGAA

Length

18 nucleotides

Bulged bases

7ZPQ|1|5|A|1221

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ZPQ|1|5|U|1218
7ZPQ|1|5|C|1219
7ZPQ|1|5|U|1220
7ZPQ|1|5|A|1221
7ZPQ|1|5|G|1222
7ZPQ|1|5|A|1223
7ZPQ|1|5|C|1224
7ZPQ|1|5|A|1225
7ZPQ|1|5|G|1226
7ZPQ|1|5|C|1227
7ZPQ|1|5|C|1228
*
7ZPQ|1|5|G|1281
7ZPQ|1|5|G|1282
7ZPQ|1|5|C|1283
7ZPQ|1|5|C|1284
7ZPQ|1|5|G|1285
7ZPQ|1|5|A|1286
7ZPQ|1|5|A|1287

Current chains

Chain 5

25S ribosomal RNA

Nearby chains

Chain BR

60S ribosomal protein L20-A

Chain Bl

60S ribosomal protein L40-A