IL_7ZPQ_166

3D structure

PDB id

7ZPQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the RQT-bound 80S ribosome from S. cerevisiae (C1)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.47 Å

Loop

Sequence

CUGA*UGCAGG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ZPQ|1|5|C|1563
7ZPQ|1|5|U|1564
7ZPQ|1|5|G|1565
7ZPQ|1|5|A|1566
*
7ZPQ|1|5|U|1572
7ZPQ|1|5|G|1573
7ZPQ|1|5|C|1574
7ZPQ|1|5|A|1575
7ZPQ|1|5|G|1576
7ZPQ|1|5|G|1577

Current chains

Chain 5

25S ribosomal RNA

Nearby chains

Chain 3

5.8S ribosomal RNA; 5.8S rRNA

Chain BG

60S ribosomal protein L8-A

Chain BW

60S ribosomal protein L25