IL_7ZPQ_168

3D structure

PDB id

7ZPQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the RQT-bound 80S ribosome from S. cerevisiae (C1)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.47 Å

Loop

Sequence

GGAUU*AGUUUUC

Length

12 nucleotides

Bulged bases

7ZPQ|1|5|U|1821

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ZPQ|1|5|G|1623
7ZPQ|1|5|G|1624
7ZPQ|1|5|A|1625
7ZPQ|1|5|U|1626
7ZPQ|1|5|U|1627
*
7ZPQ|1|5|A|1816
7ZPQ|1|5|G|1817
7ZPQ|1|5|U|1818
7ZPQ|1|5|U|1819
7ZPQ|1|5|U|1820
7ZPQ|1|5|U|1821
7ZPQ|1|5|C|1822

Current chains

Chain 5

25S ribosomal RNA

Nearby chains

Chain BY

60S ribosomal protein L27-A

Chain Bf

60S ribosomal protein L34-A