IL_7ZPQ_188

3D structure

PDB id

7ZPQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the RQT-bound 80S ribosome from S. cerevisiae (C1)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.47 Å

Loop

Sequence

CUGAAUG*CGCG

Length

11 nucleotides

Bulged bases

7ZPQ|1|5|U|2209

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ZPQ|1|5|C|2204
7ZPQ|1|5|U|2205
7ZPQ|1|5|G|2206
7ZPQ|1|5|A|2207
7ZPQ|1|5|A|2208
7ZPQ|1|5|U|2209
7ZPQ|1|5|G|2210
*
7ZPQ|1|5|C|2235
7ZPQ|1|5|G|2236
7ZPQ|1|5|C|2237
7ZPQ|1|5|G|2238

Current chains

Chain 5

25S ribosomal RNA

Nearby chains

Chain 2

Small subunit ribosomal RNA; SSU rRNA

Chain AB

40S ribosomal protein S1

Chain BA

60S ribosomal protein L2-A