3D structure

PDB id
7ZQ5 (explore in PDB, NAKB, or RNA 3D Hub)
Description
70S E. coli ribosome with truncated uL23 and uL24 loops
Experimental method
ELECTRON MICROSCOPY
Resolution
2.7 Å

Loop

Sequence
CC*GAAG
Length
6 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7ZQ5_003 not in the Motif Atlas
Homologous match to IL_7RQB_113
Geometric discrepancy: 0.132
The information below is about IL_7RQB_113
Detailed Annotation
Major groove minor groove platform; mini C-loop
Broad Annotation
No text annotation
Motif group
IL_09061.8
Basepair signature
cWW-cWS-cSH-cWW
Number of instances in this motif group
14

Unit IDs

7ZQ5|1|a|C|30
7ZQ5|1|a|C|31
*
7ZQ5|1|a|G|51
7ZQ5|1|a|A|52
7ZQ5|1|a|A|53
7ZQ5|1|a|G|54

Current chains

Chain a
5S rRNA

Nearby chains

Chain f
50S ribosomal protein L5
Chain o
50S ribosomal protein L18

Coloring options:


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