IL_7ZQ5_040
3D structure
- PDB id
- 7ZQ5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S E. coli ribosome with truncated uL23 and uL24 loops
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- GGGAAAC*GGAAGAUGUAACGGGGC
- Length
- 24 nucleotides
- Bulged bases
- 7ZQ5|1|b|A|1127, 7ZQ5|1|b|U|1130
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7ZQ5_040 not in the Motif Atlas
- Geometric match to IL_5J7L_281
- Geometric discrepancy: 0.0806
- The information below is about IL_5J7L_281
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_50715.3
- Basepair signature
- cWW-tSH-tHH-L-R-L-R-L-tWW-L-cWW-L-L-L-R-L
- Number of instances in this motif group
- 4
Unit IDs
7ZQ5|1|b|G|1024
7ZQ5|1|b|G|1025
7ZQ5|1|b|G|1026
7ZQ5|1|b|A|1027
7ZQ5|1|b|A|1028
7ZQ5|1|b|A|1029
7ZQ5|1|b|C|1030
*
7ZQ5|1|b|G|1124
7ZQ5|1|b|G|1125
7ZQ5|1|b|A|1126
7ZQ5|1|b|A|1127
7ZQ5|1|b|G|1128
7ZQ5|1|b|A|1129
7ZQ5|1|b|U|1130
7ZQ5|1|b|G|1131
7ZQ5|1|b|U|1132
7ZQ5|1|b|A|1133
7ZQ5|1|b|A|1134
7ZQ5|1|b|C|1135
7ZQ5|1|b|G|1136
7ZQ5|1|b|G|1137
7ZQ5|1|b|G|1138
7ZQ5|1|b|G|1139
7ZQ5|1|b|C|1140
Current chains
- Chain b
- 23S rRNA
Nearby chains
- Chain 8
- 50S ribosomal protein L36
- Chain a
- 5S ribosomal RNA; 5S rRNA
- Chain d
- 50S ribosomal protein L3
- Chain j
- 50S ribosomal protein L13
- Chain m
- 50S ribosomal protein L16
Coloring options: