IL_7ZQ5_054

3D structure

PDB id

7ZQ5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S E. coli ribosome with truncated uL23 and uL24 loops

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

CGAAG*CUAAG

Length

10 nucleotides

Bulged bases

7ZQ5|1|b|A|1420

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ZQ5_054 not in the Motif Atlas

Geometric match to IL_5J7L_295

Geometric discrepancy: 0.1034

The information below is about IL_5J7L_295

Detailed Annotation

UAA/GAN

Broad Annotation

No text annotation

Motif group

IL_38507.2

Basepair signature

cWW-tWH-L-tHS-cWW

Number of instances in this motif group

16

Unit IDs

7ZQ5|1|b|C|1417
7ZQ5|1|b|G|1418
7ZQ5|1|b|A|1419
7ZQ5|1|b|A|1420
7ZQ5|1|b|G|1421
*
7ZQ5|1|b|C|1577
7ZQ5|1|b|U|1578
7ZQ5|1|b|A|1579
7ZQ5|1|b|A|1580
7ZQ5|1|b|G|1581

Current chains

Chain b

23S rRNA

Nearby chains