IL_7ZQ5_063

3D structure

PDB id

7ZQ5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S E. coli ribosome with truncated uL23 and uL24 loops

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

GAGAAC*GAC

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ZQ5_063 not in the Motif Atlas

Geometric match to IL_5J7L_304

Geometric discrepancy: 0.0665

The information below is about IL_5J7L_304

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_12566.4

Basepair signature

cWW-L-tHS-L-cWW-L

Number of instances in this motif group

5

Unit IDs

7ZQ5|1|b|G|1651
7ZQ5|1|b|A|1652
7ZQ5|1|b|G|1653
7ZQ5|1|b|A|1654
7ZQ5|1|b|A|1655
7ZQ5|1|b|C|1656
*
7ZQ5|1|b|G|2004
7ZQ5|1|b|A|2005
7ZQ5|1|b|C|2006

Current chains

Chain b

23S rRNA

Nearby chains

Chain d

50S ribosomal protein L3

Chain n

50S ribosomal protein L17