IL_7ZQ5_081

3D structure

PDB id

7ZQ5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S E. coli ribosome with truncated uL23 and uL24 loops

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

GUG*CC

Length

5 nucleotides

Bulged bases

7ZQ5|1|b|U|2068

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ZQ5_081 not in the Motif Atlas

Geometric match to IL_7RQB_080

Geometric discrepancy: 0.0711

The information below is about IL_7RQB_080

Detailed Annotation

Single bulged U

Broad Annotation

No text annotation

Motif group

IL_83039.16

Basepair signature

cWW-L-cWW

Number of instances in this motif group

116

Unit IDs

7ZQ5|1|b|G|2067
7ZQ5|1|b|U|2068
7ZQ5|1|b|G|2069
*
7ZQ5|1|b|C|2442
7ZQ5|1|b|C|2443

Current chains

Chain b

23S rRNA

Nearby chains

Chain e

50S ribosomal protein L4

Chain l

50S ribosomal protein L15