IL_7ZQ5_093

3D structure

PDB id

7ZQ5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S E. coli ribosome with truncated uL23 and uL24 loops

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

CCAAG*CGACG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ZQ5_093 not in the Motif Atlas

Geometric match to IL_5J7L_338

Geometric discrepancy: 0.1058

The information below is about IL_5J7L_338

Detailed Annotation

Triple sheared

Broad Annotation

No text annotation

Motif group

IL_17948.2

Basepair signature

cWW-L-R-tSH-tHS-cWW

Number of instances in this motif group

13

Unit IDs

7ZQ5|1|b|C|2466
7ZQ5|1|b|C|2467
7ZQ5|1|b|A|2468
7ZQ5|1|b|A|2469
7ZQ5|1|b|G|2470
*
7ZQ5|1|b|C|2480
7ZQ5|1|b|G|2481
7ZQ5|1|b|A|2482
7ZQ5|1|b|C|2483
7ZQ5|1|b|G|2484

Current chains

Chain b

23S rRNA

Nearby chains

Chain 8

50S ribosomal protein L36

Chain m

50S ribosomal protein L16