IL_7ZQ5_098

3D structure

PDB id

7ZQ5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S E. coli ribosome with truncated uL23 and uL24 loops

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

CG*CAG

Length

5 nucleotides

Bulged bases

7ZQ5|1|b|A|2602

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ZQ5_098 not in the Motif Atlas

Geometric match to IL_2QUX_002

Geometric discrepancy: 0.2176

The information below is about IL_2QUX_002

Detailed Annotation

Single bulged A

Broad Annotation

No text annotation

Motif group

IL_31462.6

Basepair signature

cWW-L-cWW

Number of instances in this motif group

130

Unit IDs

7ZQ5|1|b|C|2591
7ZQ5|1|b|G|2592
*
7ZQ5|1|b|C|2601
7ZQ5|1|b|A|2602
7ZQ5|1|b|G|2603

Current chains

Chain b

23S rRNA

Nearby chains

Chain c

50S ribosomal protein L2