IL_7ZQ6_014

3D structure

PDB id

7ZQ6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S E. coli ribosome with truncated uL23 and uL24 loops and a stalled filamin domain 5 nascent chain

Experimental method

ELECTRON MICROSCOPY

Resolution

2.75 Å

Loop

Sequence

CCUGAAUC*GUGAG

Length

13 nucleotides

Bulged bases

7ZQ6|1|b|A|279

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ZQ6_014 not in the Motif Atlas

Homologous match to IL_5J7L_253

Geometric discrepancy: 0.4703

The information below is about IL_5J7L_253

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_77870.1

Basepair signature

cWW-L-R-L-tHS-L-cWW-L-cWW

Number of instances in this motif group

2

Unit IDs

7ZQ6|1|b|C|274
7ZQ6|1|b|C|275
7ZQ6|1|b|U|276
7ZQ6|1|b|G|277
7ZQ6|1|b|A|278
7ZQ6|1|b|A|279
7ZQ6|1|b|U|280
7ZQ6|1|b|C|281
*
7ZQ6|1|b|G|359
7ZQ6|1|b|U|360
7ZQ6|1|b|G|361
7ZQ6|1|b|A|362
7ZQ6|1|b|G|363

Current chains

Chain b

23S rRNA

Nearby chains