IL_7ZQ6_079

3D structure

PDB id

7ZQ6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S E. coli ribosome with truncated uL23 and uL24 loops and a stalled filamin domain 5 nascent chain

Experimental method

ELECTRON MICROSCOPY

Resolution

2.75 Å

Loop

Sequence

ACG*CUAU

Length

7 nucleotides

Bulged bases

7ZQ6|1|b|C|2055, 7ZQ6|1|b|U|2613, 7ZQ6|1|b|A|2614

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ZQ6_079 not in the Motif Atlas

Geometric match to IL_5J7L_321

Geometric discrepancy: 0.0778

The information below is about IL_5J7L_321

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_83389.2

Basepair signature

cWW-cWW

Number of instances in this motif group

5

Unit IDs

7ZQ6|1|b|A|2054
7ZQ6|1|b|C|2055
7ZQ6|1|b|G|2056
*
7ZQ6|1|b|C|2612
7ZQ6|1|b|U|2613
7ZQ6|1|b|A|2614
7ZQ6|1|b|U|2615

Current chains

Chain b

23S rRNA

Nearby chains

Chain 3

50S ribosomal protein L32

Chain d

50S ribosomal protein L3

Chain s

50S ribosomal protein L22