IL_7ZQ6_092
3D structure
- PDB id
- 7ZQ6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S E. coli ribosome with truncated uL23 and uL24 loops and a stalled filamin domain 5 nascent chain
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.75 Å
Loop
- Sequence
- AUA*UGUUU
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7ZQ6_092 not in the Motif Atlas
- Geometric match to IL_7RQB_094
- Geometric discrepancy: 0.15
- The information below is about IL_7RQB_094
- Detailed Annotation
- Major groove minor groove platform with extra cWW
- Broad Annotation
- Major groove minor groove platform; mini C-loop
- Motif group
- IL_92788.2
- Basepair signature
- cWW-L-R-L-cWW-L
- Number of instances in this motif group
- 14
Unit IDs
7ZQ6|1|b|A|2459
7ZQ6|1|b|U|2460
7ZQ6|1|b|A|2461
*
7ZQ6|1|b|U|2489
7ZQ6|1|b|G|2490
7ZQ6|1|b|U|2491
7ZQ6|1|b|U|2492
7ZQ6|1|b|U|2493
Current chains
- Chain b
- 23S rRNA
Nearby chains
- Chain m
- 50S ribosomal protein L16
Coloring options: