IL_7ZRS_052
3D structure
- PDB id
- 7ZRS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the RQT-bound 80S ribosome from S. cerevisiae (C2) - composite map
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.8 Å
Loop
- Sequence
- CGA*UCUUUGG
- Length
- 10 nucleotides
- Bulged bases
- 7ZRS|1|2|C|1096, 7ZRS|1|2|U|1098, 7ZRS|1|2|G|1100
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7ZRS_052 not in the Motif Atlas
- Homologous match to IL_4V88_437
- Geometric discrepancy: 0.1425
- The information below is about IL_4V88_437
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_62898.1
- Basepair signature
- cWW-L-R-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
7ZRS|1|2|C|1034
7ZRS|1|2|G|1035
7ZRS|1|2|A|1036
*
7ZRS|1|2|U|1095
7ZRS|1|2|C|1096
7ZRS|1|2|U|1097
7ZRS|1|2|U|1098
7ZRS|1|2|U|1099
7ZRS|1|2|G|1100
7ZRS|1|2|G|1101
Current chains
- Chain 2
- 18S ribosomal RNA
Nearby chains
- Chain AC
- RPS2 isoform 1
- Chain AL
- 40S ribosomal protein S11-A
- Chain AN
- 40S ribosomal protein S13
- Chain AW
- RPS22A isoform 1
- Chain AX
- 40S ribosomal protein S23-A
- Chain Ab
- 40S ribosomal protein S27-A
Coloring options: