IL_7ZRS_079

3D structure

PDB id

7ZRS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the RQT-bound 80S ribosome from S. cerevisiae (C2) - composite map

Experimental method

ELECTRON MICROSCOPY

Resolution

4.8 Å

Loop

Sequence

CCG*CAAG

Length

7 nucleotides

Bulged bases

7ZRS|1|2|C|1637, 7ZRS|1|2|A|1766

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ZRS_079 not in the Motif Atlas

Homologous match to IL_4V88_463

Geometric discrepancy: 0.1217

The information below is about IL_4V88_463

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_61438.1

Basepair signature

cWW-L-cWW

Number of instances in this motif group

5

Unit IDs

7ZRS|1|2|C|1636
7ZRS|1|2|C|1637
7ZRS|1|2|G|1638
*
7ZRS|1|2|C|1764
7ZRS|1|2|A|1765
7ZRS|1|2|A|1766
7ZRS|1|2|G|1767

Current chains

Chain 2

18S ribosomal RNA

Nearby chains

Chain Aa

RPS26B isoform 1

Chain Bm

RPL41A isoform 1