IL_7ZRS_249
3D structure
- PDB id
- 7ZRS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the RQT-bound 80S ribosome from S. cerevisiae (C2) - composite map
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.8 Å
Loop
- Sequence
- UUCCGGGG*CCUUGA
- Length
- 14 nucleotides
- Bulged bases
- 7ZRS|1|5|C|1017, 7ZRS|1|5|C|1018
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7ZRS_249 not in the Motif Atlas
- Geometric match to IL_6CZR_369
- Geometric discrepancy: 0.3435
- The information below is about IL_6CZR_369
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_71294.1
- Basepair signature
- cWW-cWW-L-R-L-R-cWW-cWW
- Number of instances in this motif group
- 3
Unit IDs
7ZRS|1|5|U|1015
7ZRS|1|5|U|1016
7ZRS|1|5|C|1017
7ZRS|1|5|C|1018
7ZRS|1|5|G|1019
7ZRS|1|5|G|1020
7ZRS|1|5|G|1021
7ZRS|1|5|G|1022
*
7ZRS|1|5|C|1032
7ZRS|1|5|C|1033
7ZRS|1|5|U|1034
7ZRS|1|5|U|1035
7ZRS|1|5|G|1036
7ZRS|1|5|A|1037
Current chains
- Chain 5
- 25S ribosomal RNA
Nearby chains
- Chain BI
- RPL10 isoform 1
- Chain BJ
- RPL11B isoform 1
Coloring options: