IL_7ZS5_034

3D structure

PDB id

7ZS5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of 60S ribosomal subunit from S. cerevisiae with eIF6 and tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CGUAU*AAG

Length

8 nucleotides

Bulged bases

7ZS5|1|1|A|1103

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ZS5_034 not in the Motif Atlas

Homologous match to IL_5TBW_036

Geometric discrepancy: 0.599

The information below is about IL_5TBW_036

Detailed Annotation

180 degree turn

Broad Annotation

No text annotation

Motif group

IL_42230.1

Basepair signature

cWW-L-cWW-L-L

Number of instances in this motif group

2

Unit IDs

7ZS5|1|1|C|977
7ZS5|1|1|G|978
7ZS5|1|1|U|979
7ZS5|1|1|A|980
7ZS5|1|1|U|981
*
7ZS5|1|1|A|1102
7ZS5|1|1|A|1103
7ZS5|1|1|G|1104

Current chains

Chain 1

25S ribosomal RNA

Nearby chains

Chain BH

60S ribosomal protein L7-A

Chain BR

60S ribosomal protein L18-A

Chain Bc

60S ribosomal protein L29