IL_7ZS5_069

3D structure

PDB id

7ZS5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of 60S ribosomal subunit from S. cerevisiae with eIF6 and tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CC*GUG

Length

5 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ZS5_069 not in the Motif Atlas

Geometric match to IL_5J7L_032

Geometric discrepancy: 0.1778

The information below is about IL_5J7L_032

Detailed Annotation

Single stack bend

Broad Annotation

No text annotation

Motif group

IL_26793.1

Basepair signature

cWW-L-cWW

Number of instances in this motif group

16

Unit IDs

7ZS5|1|1|C|1670
7ZS5|1|1|C|1671
*
7ZS5|1|1|G|1776
7ZS5|1|1|U|1777
7ZS5|1|1|G|1778

Current chains

Chain 1

25S ribosomal RNA

Nearby chains

Chain BS

60S ribosomal protein L19-A

Chain Bh

60S ribosomal protein L34-A