IL_7ZS5_077

3D structure

PDB id

7ZS5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of 60S ribosomal subunit from S. cerevisiae with eIF6 and tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CGUAAC*GGAUAAG

Length

13 nucleotides

Bulged bases

7ZS5|1|1|U|1931

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ZS5_077 not in the Motif Atlas

Homologous match to IL_8C3A_084

Geometric discrepancy: 0.1016

The information below is about IL_8C3A_084

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_65969.4

Basepair signature

cWW-tSH-L-R-tHH-tHS-cWW

Number of instances in this motif group

7

Unit IDs

7ZS5|1|1|C|1918
7ZS5|1|1|G|1919
7ZS5|1|1|U|1920
7ZS5|1|1|A|1921
7ZS5|1|1|A|1922
7ZS5|1|1|C|1923
*
7ZS5|1|1|G|1928
7ZS5|1|1|G|1929
7ZS5|1|1|A|1930
7ZS5|1|1|U|1931
7ZS5|1|1|A|1932
7ZS5|1|1|A|1933
7ZS5|1|1|G|1934

Current chains

Chain 1

25S ribosomal RNA

Nearby chains

Chain BB

60S ribosomal protein L43-A