IL_7ZS5_122
3D structure
- PDB id
- 7ZS5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of 60S ribosomal subunit from S. cerevisiae with eIF6 and tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- UACGAAUAAG*CGCUGAA
- Length
- 17 nucleotides
- Bulged bases
- 7ZS5|1|1|A|3180, 7ZS5|1|1|A|3186, 7ZS5|1|1|C|3206, 7ZS5|1|1|U|3207, 7ZS5|1|1|A|3209
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7ZS5_122 not in the Motif Atlas
- Homologous match to IL_5TBW_124
- Geometric discrepancy: 0.23
- The information below is about IL_5TBW_124
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_15174.1
- Basepair signature
- cWW-L-R-L-R-L-cWW-cSS-cWW-L
- Number of instances in this motif group
- 2
Unit IDs
7ZS5|1|1|U|3179
7ZS5|1|1|A|3180
7ZS5|1|1|C|3181
7ZS5|1|1|G|3182
7ZS5|1|1|A|3183
7ZS5|1|1|A|3184
7ZS5|1|1|U|3185
7ZS5|1|1|A|3186
7ZS5|1|1|A|3187
7ZS5|1|1|G|3188
*
7ZS5|1|1|C|3204
7ZS5|1|1|G|3205
7ZS5|1|1|C|3206
7ZS5|1|1|U|3207
7ZS5|1|1|G|3208
7ZS5|1|1|A|3209
7ZS5|1|1|A|3210
Current chains
- Chain 1
- 25S ribosomal RNA
Nearby chains
- Chain BG
- 60S ribosomal protein L6-A
- Chain BJ
- 60S ribosomal protein L9-A
- Chain BN
- 60S ribosomal protein L14-A
- Chain BP
- 60S ribosomal protein L16-A
- Chain BT
- 60S ribosomal protein L20-A
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