IL_7ZS5_134

3D structure

PDB id

7ZS5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of 60S ribosomal subunit from S. cerevisiae with eIF6 and tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CC*GUUG

Length

6 nucleotides

Bulged bases

7ZS5|1|1|U|3354, 7ZS5|1|1|U|3355

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ZS5_134 not in the Motif Atlas

Homologous match to IL_8C3A_142

Geometric discrepancy: 0.3679

The information below is about IL_8C3A_142

Detailed Annotation

Multiple bulged bases

Broad Annotation

No text annotation

Motif group

IL_82107.1

Basepair signature

cWW-cWW

Number of instances in this motif group

34

Unit IDs

7ZS5|1|1|C|3349
7ZS5|1|1|C|3350
*
7ZS5|1|1|G|3353
7ZS5|1|1|U|3354
7ZS5|1|1|U|3355
7ZS5|1|1|G|3356

Current chains

Chain 1

25S ribosomal RNA

Nearby chains