IL_7ZTA_013

3D structure

PDB id

7ZTA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of an Escherichia coli 70S ribosome stalled by Tetracenomycin X during translation of an MAAAPQK(C) peptide

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

GG*UGC

Length

5 nucleotides

Bulged bases

7ZTA|1|16S1|G|94

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ZTA_013 not in the Motif Atlas

Geometric match to IL_6JQ5_001

Geometric discrepancy: 0.3518

The information below is about IL_6JQ5_001

Detailed Annotation

Stack outside cWW

Broad Annotation

Stack outside cWW

Motif group

IL_00225.14

Basepair signature

cWW-L-cWW

Number of instances in this motif group

50

Unit IDs

7ZTA|1|16S1|G|75
7ZTA|1|16S1|G|76
*
7ZTA|1|16S1|U|93
7ZTA|1|16S1|G|94
7ZTA|1|16S1|C|95

Current chains

Chain 16S1

16S ribosomal RNA

Nearby chains