IL_7ZTA_025

3D structure

PDB id

7ZTA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of an Escherichia coli 70S ribosome stalled by Tetracenomycin X during translation of an MAAAPQK(C) peptide

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

UGAAGAAG*UGUAAAG

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ZTA_025 not in the Motif Atlas

Homologous match to IL_5J7L_020

Geometric discrepancy: 0.131

The information below is about IL_5J7L_020

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_28026.3

Basepair signature

cWW-tSH-tWH-cWH-L-tHW-tSS-tHH-cWW

Number of instances in this motif group

2

Unit IDs

7ZTA|1|16S1|U|409
7ZTA|1|16S1|G|410
7ZTA|1|16S1|A|411
7ZTA|1|16S1|A|412
7ZTA|1|16S1|G|413
7ZTA|1|16S1|A|414
7ZTA|1|16S1|A|415
7ZTA|1|16S1|G|416
*
7ZTA|1|16S1|U|427
7ZTA|1|16S1|G|428
7ZTA|1|16S1|U|429
7ZTA|1|16S1|A|430
7ZTA|1|16S1|A|431
7ZTA|1|16S1|A|432
7ZTA|1|16S1|G|433

Current chains

Chain 16S1

16S ribosomal RNA

Nearby chains

Chain S041

30S ribosomal protein S4