IL_7ZTA_032

3D structure

PDB id

7ZTA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of an Escherichia coli 70S ribosome stalled by Tetracenomycin X during translation of an MAAAPQK(C) peptide

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

CGCAG*UCAGG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ZTA_032 not in the Motif Atlas

Homologous match to IL_5J7L_027

Geometric discrepancy: 0.0859

The information below is about IL_5J7L_027

Detailed Annotation

tSH-tHW-tHS

Broad Annotation

No text annotation

Motif group

IL_17136.7

Basepair signature

cWW-tSH-tHW-tHS-cWW

Number of instances in this motif group

14

Unit IDs

7ZTA|1|16S1|C|580
7ZTA|1|16S1|G|581
7ZTA|1|16S1|C|582
7ZTA|1|16S1|A|583
7ZTA|1|16S1|G|584
*
7ZTA|1|16S1|U|757
7ZTA|1|16S1|C|758
7ZTA|1|16S1|A|759
7ZTA|1|16S1|G|760
7ZTA|1|16S1|G|761

Current chains

Chain 16S1

16S ribosomal RNA

Nearby chains

Chain S081

30S ribosomal protein S8

Chain S121

30S ribosomal protein S12

Chain S151

30S ribosomal protein S15

Chain S171

30S ribosomal protein S17