IL_7ZTA_051

3D structure

PDB id

7ZTA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of an Escherichia coli 70S ribosome stalled by Tetracenomycin X during translation of an MAAAPQK(C) peptide

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

GCU*G(2MG)C

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ZTA_051 not in the Motif Atlas

Geometric match to IL_4WF9_042

Geometric discrepancy: 0.1466

The information below is about IL_4WF9_042

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_01003.4

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

215

Unit IDs

7ZTA|1|16S1|G|1050
7ZTA|1|16S1|C|1051
7ZTA|1|16S1|U|1052
*
7ZTA|1|16S1|G|1206
7ZTA|1|16S1|2MG|1207
7ZTA|1|16S1|C|1208

Current chains

Chain 16S1

16S ribosomal RNA

Nearby chains

Chain ATR1

Transfer RNA; tRNA

Chain S031

30S ribosomal protein S3

Chain S141

30S ribosomal protein S14