IL_7ZTA_057

3D structure

PDB id

7ZTA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of an Escherichia coli 70S ribosome stalled by Tetracenomycin X during translation of an MAAAPQK(C) peptide

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

CAGC*GG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ZTA_057 not in the Motif Atlas

Homologous match to IL_5J7L_052

Geometric discrepancy: 0.2137

The information below is about IL_5J7L_052

Detailed Annotation

Minor groove platform

Broad Annotation

No text annotation

Motif group

IL_15052.4

Basepair signature

cWW-L-cWW-L

Number of instances in this motif group

8

Unit IDs

7ZTA|1|16S1|C|1129
7ZTA|1|16S1|A|1130
7ZTA|1|16S1|G|1131
7ZTA|1|16S1|C|1132
*
7ZTA|1|16S1|G|1142
7ZTA|1|16S1|G|1143

Current chains

Chain 16S1

16S ribosomal RNA

Nearby chains

Chain S091

30S ribosomal protein S9

Chain S101

30S ribosomal protein S10