IL_7ZTA_062

3D structure

PDB id

7ZTA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of an Escherichia coli 70S ribosome stalled by Tetracenomycin X during translation of an MAAAPQK(C) peptide

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

CGGAUU*AUGAAG

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ZTA_062 not in the Motif Atlas

Homologous match to IL_5J7L_057

Geometric discrepancy: 0.1149

The information below is about IL_5J7L_057

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_85536.2

Basepair signature

cWW-tSH-L-R-tHS-cWW-cWW

Number of instances in this motif group

8

Unit IDs

7ZTA|1|16S1|C|1303
7ZTA|1|16S1|G|1304
7ZTA|1|16S1|G|1305
7ZTA|1|16S1|A|1306
7ZTA|1|16S1|U|1307
7ZTA|1|16S1|U|1308
*
7ZTA|1|16S1|A|1329
7ZTA|1|16S1|U|1330
7ZTA|1|16S1|G|1331
7ZTA|1|16S1|A|1332
7ZTA|1|16S1|A|1333
7ZTA|1|16S1|G|1334

Current chains

Chain 16S1

16S ribosomal RNA

Nearby chains

Chain S131

30S ribosomal protein S13