IL_7ZTA_070

3D structure

PDB id

7ZTA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of an Escherichia coli 70S ribosome stalled by Tetracenomycin X during translation of an MAAAPQK(C) peptide

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

UAAC*GAG

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ZTA_070 not in the Motif Atlas

Homologous match to IL_5J7L_065

Geometric discrepancy: 0.1367

The information below is about IL_5J7L_065

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_31531.3

Basepair signature

cWW-L-R-L-cWW

Number of instances in this motif group

13

Unit IDs

7ZTA|1|16S1|U|1445
7ZTA|1|16S1|A|1446
7ZTA|1|16S1|A|1447
7ZTA|1|16S1|C|1448
*
7ZTA|1|16S1|G|1455
7ZTA|1|16S1|A|1456
7ZTA|1|16S1|G|1457

Current chains

Chain 16S1

16S ribosomal RNA

Nearby chains

Chain S201

30S ribosomal protein S20