IL_7ZTA_078

3D structure

PDB id

7ZTA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of an Escherichia coli 70S ribosome stalled by Tetracenomycin X during translation of an MAAAPQK(C) peptide

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

CAG*CGAUG

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ZTA_078 not in the Motif Atlas

Homologous match to IL_5J7L_252

Geometric discrepancy: 0.1453

The information below is about IL_5J7L_252

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_47972.1

Basepair signature

cWW-L-R-L-cWW-L

Number of instances in this motif group

1

Unit IDs

7ZTA|1|23S1|C|269
7ZTA|1|23S1|A|270
7ZTA|1|23S1|G|271
*
7ZTA|1|23S1|C|366
7ZTA|1|23S1|G|367
7ZTA|1|23S1|A|368
7ZTA|1|23S1|U|369
7ZTA|1|23S1|G|370

Current chains

Chain 23S1

23S ribosomal RNA

Nearby chains

Chain L281

50S ribosomal protein L28