IL_7ZTA_119

3D structure

PDB id

7ZTA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of an Escherichia coli 70S ribosome stalled by Tetracenomycin X during translation of an MAAAPQK(C) peptide

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

CGAGG*CGUAG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ZTA_119 not in the Motif Atlas

Homologous match to IL_5J7L_293

Geometric discrepancy: 0.0784

The information below is about IL_5J7L_293

Detailed Annotation

tSH-tHW-tHS

Broad Annotation

No text annotation

Motif group

IL_17136.7

Basepair signature

cWW-tSH-tHW-tHS-cWW

Number of instances in this motif group

14

Unit IDs

7ZTA|1|23S1|C|1357
7ZTA|1|23S1|G|1358
7ZTA|1|23S1|A|1359
7ZTA|1|23S1|G|1360
7ZTA|1|23S1|G|1361
*
7ZTA|1|23S1|C|1370
7ZTA|1|23S1|G|1371
7ZTA|1|23S1|U|1372
7ZTA|1|23S1|A|1373
7ZTA|1|23S1|G|1374

Current chains

Chain 23S1

23S ribosomal RNA

Nearby chains

Chain L021

50S ribosomal protein L2

Chain L341

50S ribosomal protein L34