IL_7ZTA_134

3D structure

PDB id

7ZTA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of an Escherichia coli 70S ribosome stalled by Tetracenomycin X during translation of an MAAAPQK(C) peptide

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

CGUAAC*GGAGAAG

Length

13 nucleotides

Bulged bases

7ZTA|1|23S1|G|1699

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ZTA_134 not in the Motif Atlas

Geometric match to IL_5J7L_308

Geometric discrepancy: 0.0723

The information below is about IL_5J7L_308

Detailed Annotation

tSH-tSH-tHH-tHS

Broad Annotation

No text annotation

Motif group

IL_47346.2

Basepair signature

cWW-tSH-L-R-tHH-tHS-cWW

Number of instances in this motif group

7

Unit IDs

7ZTA|1|23S1|C|1686
7ZTA|1|23S1|G|1687
7ZTA|1|23S1|U|1688
7ZTA|1|23S1|A|1689
7ZTA|1|23S1|A|1690
7ZTA|1|23S1|C|1691
*
7ZTA|1|23S1|G|1696
7ZTA|1|23S1|G|1697
7ZTA|1|23S1|A|1698
7ZTA|1|23S1|G|1699
7ZTA|1|23S1|A|1700
7ZTA|1|23S1|A|1701
7ZTA|1|23S1|G|1702

Current chains

Chain 23S1

23S ribosomal RNA

Nearby chains

Chain 16S1

Small subunit ribosomal RNA; SSU rRNA

Chain L021

50S ribosomal protein L2