IL_7ZTA_151

3D structure

PDB id

7ZTA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of an Escherichia coli 70S ribosome stalled by Tetracenomycin X during translation of an MAAAPQK(C) peptide

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

UAG*UGGG

Length

7 nucleotides

Bulged bases

7ZTA|1|23S1|G|2238

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ZTA_151 not in the Motif Atlas

Homologous match to IL_5J7L_325

Geometric discrepancy: 0.0731

The information below is about IL_5J7L_325

Detailed Annotation

Isolated tHS basepair with bulges

Broad Annotation

No text annotation

Motif group

IL_85599.2

Basepair signature

cWW-tHS-cWW

Number of instances in this motif group

9

Unit IDs

7ZTA|1|23S1|U|2081
7ZTA|1|23S1|A|2082
7ZTA|1|23S1|G|2083
*
7ZTA|1|23S1|U|2236
7ZTA|1|23S1|G|2237
7ZTA|1|23S1|G|2238
7ZTA|1|23S1|G|2239

Current chains

Chain 23S1

23S ribosomal RNA

Nearby chains

Chain ETR1

Transfer RNA; tRNA

Chain L021

50S ribosomal protein L2

Chain L281

50S ribosomal protein L28