IL_7ZUW_040

3D structure

PDB id

7ZUW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of RQT (C1) bound to the stalled ribosome in a disome unit from S. cerevisiae

Experimental method

ELECTRON MICROSCOPY

Resolution

4.3 Å

Loop

Sequence

ACGUUU*AUCGU

Length

11 nucleotides

Bulged bases

7ZUW|1|2|U|820

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ZUW_040 not in the Motif Atlas

Homologous match to IL_8P9A_416

Geometric discrepancy: 0.3988

The information below is about IL_8P9A_416

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ZUW|1|2|A|817
7ZUW|1|2|C|818
7ZUW|1|2|G|819
7ZUW|1|2|U|820
7ZUW|1|2|U|821
7ZUW|1|2|U|822
*
7ZUW|1|2|A|850
7ZUW|1|2|U|851
7ZUW|1|2|C|852
7ZUW|1|2|G|853
7ZUW|1|2|U|854

Current chains

Chain 2

18S ribosomal RNA

Nearby chains

Chain AH

40S ribosomal protein S7-A

Chain BQ

60S ribosomal protein L19-A