IL_7ZUW_091

3D structure

PDB id

7ZUW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of RQT (C1) bound to the stalled ribosome in a disome unit from S. cerevisiae

Experimental method

ELECTRON MICROSCOPY

Resolution

4.3 Å

Loop

Sequence

GU*GAC

Length

5 nucleotides

Bulged bases

7ZUW|1|5|A|338

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ZUW_091 not in the Motif Atlas

Homologous match to IL_5TBW_013

Geometric discrepancy: 0.1177

The information below is about IL_5TBW_013

Detailed Annotation

Single bulged A

Broad Annotation

No text annotation

Motif group

IL_31462.1

Basepair signature

cWW-L-cWW

Number of instances in this motif group

127

Unit IDs

7ZUW|1|3|G|25
7ZUW|1|3|U|26
*
7ZUW|1|5|G|337
7ZUW|1|5|A|338
7ZUW|1|5|C|339

Current chains

Chain 3

5.8S ribosomal RNA

Chain 5

25S ribosomal RNA

Nearby chains

Chain BC

RPL4A isoform 1

Chain BX

60S ribosomal protein L26-A