IL_7ZUW_110

3D structure

PDB id

7ZUW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of RQT (C1) bound to the stalled ribosome in a disome unit from S. cerevisiae

Experimental method

ELECTRON MICROSCOPY

Resolution

4.3 Å

Loop

Sequence

UG*UUUGUA

Length

8 nucleotides

Bulged bases

7ZUW|1|5|U|252

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ZUW_110 not in the Motif Atlas

Homologous match to IL_5TBW_010

Geometric discrepancy: 0.2704

The information below is about IL_5TBW_010

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_37379.1

Basepair signature

cWW-L-cWW-L-L

Number of instances in this motif group

1

Unit IDs

7ZUW|1|5|U|169
7ZUW|1|5|G|170
*
7ZUW|1|5|U|248
7ZUW|1|5|U|249
7ZUW|1|5|U|250
7ZUW|1|5|G|251
7ZUW|1|5|U|252
7ZUW|1|5|A|253

Current chains

Chain 5

25S ribosomal RNA

Nearby chains

Chain BG

60S ribosomal protein L8

Chain BK

60S ribosomal protein L13-A

Chain Bg

60S ribosomal protein L35-A