IL_7ZUW_111

3D structure

PDB id

7ZUW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of RQT (C1) bound to the stalled ribosome in a disome unit from S. cerevisiae

Experimental method

ELECTRON MICROSCOPY

Resolution

4.3 Å

Loop

Sequence

UU*AGUG

Length

6 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ZUW_111 not in the Motif Atlas

Geometric match to IL_4WF9_026

Geometric discrepancy: 0.3846

The information below is about IL_4WF9_026

Detailed Annotation

Major groove platform

Broad Annotation

No text annotation

Motif group

IL_48076.8

Basepair signature

cWW-cSH-cWW

Number of instances in this motif group

43

Unit IDs

7ZUW|1|5|U|177
7ZUW|1|5|U|178
*
7ZUW|1|5|A|238
7ZUW|1|5|G|239
7ZUW|1|5|U|240
7ZUW|1|5|G|241

Current chains

Chain 5

25S ribosomal RNA

Nearby chains

Chain BK

60S ribosomal protein L13-A

Chain Bg

60S ribosomal protein L35-A

Chain Bi

60S ribosomal protein L37-A