IL_7ZUW_153

3D structure

PDB id

7ZUW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of RQT (C1) bound to the stalled ribosome in a disome unit from S. cerevisiae

Experimental method

ELECTRON MICROSCOPY

Resolution

4.3 Å

Loop

Sequence

GUGGC*GAAUC

Length

10 nucleotides

Bulged bases

7ZUW|1|5|G|1237

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ZUW_153 not in the Motif Atlas

Homologous match to IL_8C3A_058

Geometric discrepancy: 0.5895

The information below is about IL_8C3A_058

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_30542.5

Basepair signature

cWW-L-R-L-R-L-cWW

Number of instances in this motif group

2

Unit IDs

7ZUW|1|5|G|1235
7ZUW|1|5|U|1236
7ZUW|1|5|G|1237
7ZUW|1|5|G|1238
7ZUW|1|5|C|1239
*
7ZUW|1|5|G|1251
7ZUW|1|5|A|1252
7ZUW|1|5|A|1253
7ZUW|1|5|U|1254
7ZUW|1|5|C|1255

Current chains

Chain 5

25S ribosomal RNA

Nearby chains