IL_7ZUW_191

3D structure

PDB id

7ZUW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of RQT (C1) bound to the stalled ribosome in a disome unit from S. cerevisiae

Experimental method

ELECTRON MICROSCOPY

Resolution

4.3 Å

Loop

Sequence

GUU*AC

Length

5 nucleotides

Bulged bases

7ZUW|1|5|U|2411

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ZUW_191 not in the Motif Atlas

Homologous match to IL_8C3A_098

Geometric discrepancy: 0.1229

The information below is about IL_8C3A_098

Detailed Annotation

Single bulged U

Broad Annotation

No text annotation

Motif group

IL_83039.19

Basepair signature

cWW-L-cWW

Number of instances in this motif group

123

Unit IDs

7ZUW|1|5|G|2410
7ZUW|1|5|U|2411
7ZUW|1|5|U|2412
*
7ZUW|1|5|A|2812
7ZUW|1|5|C|2813

Current chains

Chain 5

25S ribosomal RNA

Nearby chains

Chain BC

RPL4A isoform 1

Chain BZ

60S ribosomal protein L28