IL_7ZUW_204

3D structure

PDB id

7ZUW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of RQT (C1) bound to the stalled ribosome in a disome unit from S. cerevisiae

Experimental method

ELECTRON MICROSCOPY

Resolution

4.3 Å

Loop

Sequence

UCAAG*CGACA

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ZUW_204 not in the Motif Atlas

Homologous match to IL_8C3A_114

Geometric discrepancy: 0.1215

The information below is about IL_8C3A_114

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_65585.1

Basepair signature

cWW-L-R-tSH-tHS-cWW

Number of instances in this motif group

13

Unit IDs

7ZUW|1|5|U|2836
7ZUW|1|5|C|2837
7ZUW|1|5|A|2838
7ZUW|1|5|A|2839
7ZUW|1|5|G|2840
*
7ZUW|1|5|C|2850
7ZUW|1|5|G|2851
7ZUW|1|5|A|2852
7ZUW|1|5|C|2853
7ZUW|1|5|A|2854

Current chains

Chain 5

25S ribosomal RNA

Nearby chains

Chain BI

RPL10 isoform 1

Chain Bl

60S ribosomal protein L40-A