IL_7ZUW_234

3D structure

PDB id

7ZUW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of RQT (C1) bound to the stalled ribosome in a disome unit from S. cerevisiae

Experimental method

ELECTRON MICROSCOPY

Resolution

4.3 Å

Loop

Sequence

UCA*UA

Length

5 nucleotides

Bulged bases

7ZUW|1|2|C|25

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ZUW_234 not in the Motif Atlas

Homologous match to IL_8P9A_373

Geometric discrepancy: 0.3865

The information below is about IL_8P9A_373

Detailed Annotation

Single bulged C

Broad Annotation

No text annotation

Motif group

IL_05642.1

Basepair signature

cWW-L-cWW

Number of instances in this motif group

50

Unit IDs

7ZUW|1|2|U|24
7ZUW|1|2|C|25
7ZUW|1|2|A|26
*
7ZUW|1|2|U|600
7ZUW|1|2|A|601

Current chains

Chain 2

18S ribosomal RNA

Nearby chains

Chain AJ

40S ribosomal protein S9-A

Chain AX

40S ribosomal protein S23-A