3D structure

PDB id
7ZUX (explore in PDB, NAKB, or RNA 3D Hub)
Description
Collided ribosome in a disome unit from S. cerevisiae
Experimental method
ELECTRON MICROSCOPY
Resolution
2.5 Å

Loop

Sequence
CGA*UCUUUGG
Length
10 nucleotides
Bulged bases
7ZUX|1|2|C|1096, 7ZUX|1|2|U|1098, 7ZUX|1|2|G|1100
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7ZUX_052 not in the Motif Atlas
Homologous match to IL_4V88_437
Geometric discrepancy: 0.1354
The information below is about IL_4V88_437
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_62898.1
Basepair signature
cWW-L-R-L-cWW
Number of instances in this motif group
2

Unit IDs

7ZUX|1|2|C|1034
7ZUX|1|2|G|1035
7ZUX|1|2|A|1036
*
7ZUX|1|2|U|1095
7ZUX|1|2|C|1096
7ZUX|1|2|U|1097
7ZUX|1|2|U|1098
7ZUX|1|2|U|1099
7ZUX|1|2|G|1100
7ZUX|1|2|G|1101

Current chains

Chain 2
18S ribosomal RNA

Nearby chains

Chain DC
40S ribosomal protein S2
Chain DL
40S ribosomal protein S11-A
Chain DN
40S ribosomal protein S13
Chain DW
40S ribosomal protein S22-A
Chain DX
40S ribosomal protein S23-A
Chain Db
40S ribosomal protein S27-A

Coloring options:


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