3D structure

PDB id
7ZUX (explore in PDB, NAKB, or RNA 3D Hub)
Description
Collided ribosome in a disome unit from S. cerevisiae
Experimental method
ELECTRON MICROSCOPY
Resolution
2.5 Å

Loop

Sequence
UGAAG*UGGAG
Length
10 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7ZUX_131 not in the Motif Atlas
Homologous match to IL_8C3A_033
Geometric discrepancy: 0.0667
The information below is about IL_8C3A_033
Detailed Annotation
Triple sheared
Broad Annotation
No text annotation
Motif group
IL_95716.2
Basepair signature
cWW-cWW-tHS-tHS-tSH-cWW
Number of instances in this motif group
18

Unit IDs

7ZUX|1|5|U|835
7ZUX|1|5|G|836
7ZUX|1|5|A|837
7ZUX|1|5|A|838
7ZUX|1|5|G|839
*
7ZUX|1|5|U|856
7ZUX|1|5|G|857
7ZUX|1|5|G|858
7ZUX|1|5|A|859
7ZUX|1|5|G|860

Current chains

Chain 5
25S ribosomal RNA

Nearby chains

Chain EA
60S ribosomal protein L2-A
Chain EQ
60S ribosomal protein L19-A
Chain Eo
60S ribosomal protein L43-A

Coloring options:


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