IL_7ZUX_153
3D structure
- PDB id
- 7ZUX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Collided ribosome in a disome unit from S. cerevisiae
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.5 Å
Loop
- Sequence
- GACACCACAAAA*UGAAAAUGGAUGGCGC
- Length
- 28 nucleotides
- Bulged bases
- 7ZUX|1|5|C|1197, 7ZUX|1|5|A|1303
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7ZUX_153 not in the Motif Atlas
- Geometric match to IL_5TBW_052
- Geometric discrepancy: 0.0702
- The information below is about IL_5TBW_052
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_53762.1
- Basepair signature
- cWW-tSH-tHH-L-R-L-R-L-R-L-R-L-R-L-R-L-cWW-L-cWW-L
- Number of instances in this motif group
- 2
Unit IDs
7ZUX|1|5|G|1195
7ZUX|1|5|A|1196
7ZUX|1|5|C|1197
7ZUX|1|5|A|1198
7ZUX|1|5|C|1199
7ZUX|1|5|C|1200
7ZUX|1|5|A|1201
7ZUX|1|5|C|1202
7ZUX|1|5|A|1203
7ZUX|1|5|A|1204
7ZUX|1|5|A|1205
7ZUX|1|5|A|1206
*
7ZUX|1|5|U|1300
7ZUX|1|5|G|1301
7ZUX|1|5|A|1302
7ZUX|1|5|A|1303
7ZUX|1|5|A|1304
7ZUX|1|5|A|1305
7ZUX|1|5|U|1306
7ZUX|1|5|G|1307
7ZUX|1|5|G|1308
7ZUX|1|5|A|1309
7ZUX|1|5|U|1310
7ZUX|1|5|G|1311
7ZUX|1|5|G|1312
7ZUX|1|5|C|1313
7ZUX|1|5|G|1314
7ZUX|1|5|C|1315
Current chains
- Chain 5
- 25S ribosomal RNA
Nearby chains
- Chain 4
- 5S ribosomal RNA; 5S rRNA
- Chain EB
- 60S ribosomal protein L3
- Chain EF
- 60S ribosomal protein L7-A
- Chain EI
- 60S ribosomal protein L10
- Chain EN
- 60S ribosomal protein L16-A
- Chain Ee
- 60S ribosomal protein L33-A
- Chain El
- 60S ribosomal protein L40-A
Coloring options: