3D structure

PDB id
7ZUX (explore in PDB, NAKB, or RNA 3D Hub)
Description
Collided ribosome in a disome unit from S. cerevisiae
Experimental method
ELECTRON MICROSCOPY
Resolution
2.5 Å

Loop

Sequence
CGU*AGUG
Length
7 nucleotides
Bulged bases
7ZUX|1|5|G|1430
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7ZUX_158 not in the Motif Atlas
Homologous match to IL_8C3A_061
Geometric discrepancy: 0.0393
The information below is about IL_8C3A_061
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_73554.3
Basepair signature
cWW-cWS-cWW
Number of instances in this motif group
10

Unit IDs

7ZUX|1|5|C|1377
7ZUX|1|5|G|1378
7ZUX|1|5|U|1379
*
7ZUX|1|5|A|1429
7ZUX|1|5|G|1430
7ZUX|1|5|U|1431
7ZUX|1|5|G|1432

Current chains

Chain 5
25S ribosomal RNA

Nearby chains

Chain 3
5.8S ribosomal RNA; 5.8S rRNA
Chain EC
60S ribosomal protein L4-A
Chain EZ
60S ribosomal protein L28
Chain Ed
60S ribosomal protein L32

Coloring options:


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