3D structure

PDB id
7ZUX (explore in PDB, NAKB, or RNA 3D Hub)
Description
Collided ribosome in a disome unit from S. cerevisiae
Experimental method
ELECTRON MICROSCOPY
Resolution
2.5 Å

Loop

Sequence
UCUUC*GGAAUA
Length
11 nucleotides
Bulged bases
7ZUX|1|5|U|1630, 7ZUX|1|5|U|1816
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7ZUX_170 not in the Motif Atlas
Geometric match to IL_5TBW_066
Geometric discrepancy: 0.2419
The information below is about IL_5TBW_066
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_48431.1
Basepair signature
cWW-L-R-L-R-L-cWW
Number of instances in this motif group
2

Unit IDs

7ZUX|1|5|U|1628
7ZUX|1|5|C|1629
7ZUX|1|5|U|1630
7ZUX|1|5|U|1631
7ZUX|1|5|C|1632
*
7ZUX|1|5|G|1812
7ZUX|1|5|G|1813
7ZUX|1|5|A|1814
7ZUX|1|5|A|1815
7ZUX|1|5|U|1816
7ZUX|1|5|A|1817

Current chains

Chain 5
25S ribosomal RNA

Nearby chains

Chain EY
60S ribosomal protein L27-A

Coloring options:


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