3D structure

PDB id
7ZUX (explore in PDB, NAKB, or RNA 3D Hub)
Description
Collided ribosome in a disome unit from S. cerevisiae
Experimental method
ELECTRON MICROSCOPY
Resolution
2.5 Å

Loop

Sequence
UUAAC*GGAAGA
Length
11 nucleotides
Bulged bases
7ZUX|1|5|G|1752
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7ZUX_175 not in the Motif Atlas
Homologous match to IL_8C3A_077
Geometric discrepancy: 0.0854
The information below is about IL_8C3A_077
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_69313.1
Basepair signature
cWW-tWH-tHH-tHS-cWW
Number of instances in this motif group
2

Unit IDs

7ZUX|1|5|U|1695
7ZUX|1|5|U|1696
7ZUX|1|5|A|1697
7ZUX|1|5|A|1698
7ZUX|1|5|C|1699
*
7ZUX|1|5|G|1748
7ZUX|1|5|G|1749
7ZUX|1|5|A|1750
7ZUX|1|5|A|1751
7ZUX|1|5|G|1752
7ZUX|1|5|A|1753

Current chains

Chain 5
25S ribosomal RNA

Nearby chains

Chain Ef
60S ribosomal protein L34-A
Chain Ej
60S ribosomal protein L38

Coloring options:


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