IL_7ZUX_190

3D structure

PDB id

7ZUX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Collided ribosome in a disome unit from S. cerevisiae

Experimental method

ELECTRON MICROSCOPY

Resolution

2.5 Å

Loop

Sequence

UCAAAGU*AACCAAG

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ZUX_190 not in the Motif Atlas

Homologous match to IL_5TBW_088

Geometric discrepancy: 0.126

The information below is about IL_5TBW_088

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_36973.8

Basepair signature

cWW-tSH-L-R-L-R-L-R-cWW-cWW

Number of instances in this motif group

3

Unit IDs

7ZUX|1|5|U|2212
7ZUX|1|5|C|2213
7ZUX|1|5|A|2214
7ZUX|1|5|A|2215
7ZUX|1|5|A|2216
7ZUX|1|5|G|2217
7ZUX|1|5|U|2218
*
7ZUX|1|5|A|2229
7ZUX|1|5|A|2230
7ZUX|1|5|C|2231
7ZUX|1|5|C|2232
7ZUX|1|5|A|2233
7ZUX|1|5|A|2234
7ZUX|1|5|G|2235

Current chains

Chain 5

25S ribosomal RNA

Nearby chains

Chain 7

Transfer RNA; tRNA

Chain Eh

60S ribosomal protein L36-A