IL_7ZUX_199

3D structure

PDB id

7ZUX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Collided ribosome in a disome unit from S. cerevisiae

Experimental method

ELECTRON MICROSCOPY

Resolution

2.5 Å

Loop

Sequence

CA*UAG

Length

5 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ZUX_199 not in the Motif Atlas

Geometric match to IL_4R4V_001

Geometric discrepancy: 0.2483

The information below is about IL_4R4V_001

Detailed Annotation

Minor groove platform

Broad Annotation

No text annotation

Motif group

IL_34520.3

Basepair signature

cWW-cSH-cWW

Number of instances in this motif group

61

Unit IDs

7ZUX|1|5|C|2445
7ZUX|1|5|A|2446
*
7ZUX|1|5|U|2502
7ZUX|1|5|A|2503
7ZUX|1|5|G|2504

Current chains

Chain 5

25S ribosomal RNA

Nearby chains

Chain Eh

60S ribosomal protein L36-A