IL_7ZUX_211

3D structure

PDB id

7ZUX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Collided ribosome in a disome unit from S. cerevisiae

Experimental method

ELECTRON MICROSCOPY

Resolution

2.5 Å

Loop

Sequence

CUC*GUGAG

Length

8 nucleotides

Bulged bases

7ZUX|1|5|G|2946, 7ZUX|1|5|A|2947

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ZUX_211 not in the Motif Atlas

Geometric match to IL_5TBW_108

Geometric discrepancy: 0.0852

The information below is about IL_5TBW_108

Detailed Annotation

Isolated non-canonical cWW with bulges

Broad Annotation

Isolated non-canonical cWW with bulges

Motif group

IL_54650.3

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

16

Unit IDs

7ZUX|1|5|C|2880
7ZUX|1|5|U|2881
7ZUX|1|5|C|2882
*
7ZUX|1|5|G|2944
7ZUX|1|5|U|2945
7ZUX|1|5|G|2946
7ZUX|1|5|A|2947
7ZUX|1|5|G|2948

Current chains

Chain 5

25S ribosomal RNA

Nearby chains

Chain EB

60S ribosomal protein L3

Chain EU

60S ribosomal protein L23-A